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学者姓名:洪诚

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A comprehensive molecular cytogenetic analysis of the genome architecture in modern sugarcane cultivars SCIE
期刊论文 | 2022 , 30 (1) , 29-41 | CHROMOSOME RESEARCH
WoS CC Cited Count: 13
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Abstract :

Modern sugarcane cultivars are derived from the hybridization of Saccharum officinarum (2n = 80) and S. spontaneum (2n = 40-128), leading to a variety of complex genomes with highly polyploid and varied chromosome structures. These complex genomes have hindered deciphering the genome structure and marker-assisted selection in sugarcane breeding. Ten cultivars were analyzed by fluorescence in situ hybridization adopting chromosome painting and S. spontaneum-specific probes. The results showed six types of chromosomes in the studied cultivars, including S. spontaneum or S. officinarum chromosomes, interspecific recombinations from homoeologous or nonhomoeologous chromosomes, and translocations of S. spontaneum or S. officinarum chromosomes. The results showed unexpectedly high proportions of interspecific recombinations in these cultivars (11.9-40.9%), which renew our knowledge that less than 13% of chromosomes result from interspecific exchanges. Also, the results showed a high frequency of translocations (an average of 2.15 translocations per chromosome) between S. officinarum chromosomes. The diverse types of chromosomes in cultivars imply that hybrid gametes of S. spontaneum and S. officinarum may form unusual chromosome pairs, including homoeologous or nonhomoeologous chromosomes either between or within S. spontaneum and S. officinarum. Moreover, we consistently observed 11 or 12 copies for the four studied chromosomes, i.e., chromosomes 1, 2, 7, and 8, suggesting steady transmission during the breeding program. By comparison, we found a relatively fewer copies of S. spontaneum chromosome 1 than those of S. spontaneum chromosomes 2, 7, and 8. These results provide deep insights into the structure of cultivars and may facilitate chromosome-assisted selection in sugarcane breeding.

Keyword :

Chromosome painting Chromosome painting FISH FISH Genome structure Genome structure Interspecific recombination Interspecific recombination Sugarcane cultivar Sugarcane cultivar

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GB/T 7714 Wang, Kai , Cheng, Hon , Han, Jinlei et al. A comprehensive molecular cytogenetic analysis of the genome architecture in modern sugarcane cultivars [J]. | CHROMOSOME RESEARCH , 2022 , 30 (1) : 29-41 .
MLA Wang, Kai et al. "A comprehensive molecular cytogenetic analysis of the genome architecture in modern sugarcane cultivars" . | CHROMOSOME RESEARCH 30 . 1 (2022) : 29-41 .
APA Wang, Kai , Cheng, Hon , Han, Jinlei , Esh, Ayman , Liu, Jiayong , Zhang, Yuebin et al. A comprehensive molecular cytogenetic analysis of the genome architecture in modern sugarcane cultivars . | CHROMOSOME RESEARCH , 2022 , 30 (1) , 29-41 .
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