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学者姓名：陈建清
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Abstract ：
High temperature reduces anthocyanin accumulation in various horticultural plants. However, the molecular mechanisms underlying the high-temperature-induced reduction of anthocyanin in grape (Vitis vinifera) remain poorly understood. In this study, VvMYB44-1 was identified as a transcriptional repressor of anthocyanin biosynthesis in grape berries, and its gene expression was strongly induced by high-temperature treatment. Overexpression of VvMYB44-1 inhibited anthocyanin accumulation in both grape berries and tobacco (Nicotiana tabacum) by repressing the transcription of the anthocyanin biosynthesis genes dihydroflavonol-4-reductase (VvDFR) and UDP-glucose flavonoid-3-O-glucosyltransferase (VvUFGT). Furthermore, the interaction between VvMYB44-1 and VvWDR2 competitively inhibited the formation of the MYB-bHLH-WD40 (MBW) activation complex and weakened the transcriptional activity of the complex, thereby decreasing anthocyanin accumulation. Additionally, VvMYB44-1 facilitated cytokinin (CK) accumulation by upregulating the expression of the CK synthesis gene lonely guy 8 (VvLOG8) and inhibiting the CK degradation gene CK oxidase 4(VvCKX4), thus contributing to CK-mediated anthocyanin inhibition in grape berries. Moreover, the inhibitory effect of VvMYB44-1 on anthocyanin biosynthesis and its downstream target genes was weakened with the deletion of the ethylene-responsive element binding factor-associated amphiphilic repression (EAR) motif, indicating that the EAR motif is indispensable for the inhibitory effect of VvMYB44-1 on anthocyanin biosynthesis in grapes. These results provide insights into the regulatory network of VvMYB44-1 in high-temperature-mediated anthocyanin biosynthesis in grapes. Transcription factor VvMYB44-1 negatively regulates high-temperature-mediated anthocyanin biosynthesis in grapevine.
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| GB/T 7714 | Leng, Xiangpeng , Li, Chen , Wang, Peipei et al. The transcription factor VvMYB44-1 plays a role in reducing grapevine anthocyanin biosynthesis at high temperature [J]. | PLANT PHYSIOLOGY , 2025 , 197 (2) . |
| MLA | Leng, Xiangpeng et al. "The transcription factor VvMYB44-1 plays a role in reducing grapevine anthocyanin biosynthesis at high temperature" . | PLANT PHYSIOLOGY 197 . 2 (2025) . |
| APA | Leng, Xiangpeng , Li, Chen , Wang, Peipei , Ren, Yiran , Chen, Jianqing , Liu, Guangchao et al. The transcription factor VvMYB44-1 plays a role in reducing grapevine anthocyanin biosynthesis at high temperature . | PLANT PHYSIOLOGY , 2025 , 197 (2) . |
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Bitter melon, an important medicinal and edible economic crop, is often threatened by diseases such as downy mildew, powdery mildew, viral diseases, anthracnose, and blight during its growth. Efficient and accurate disease detection is of significant importance for achieving sustainable disease management in bitter melon cultivation. To address the issues of weak generalization ability and high computational demands in existing deep learning models in complex field environments, this study proposes an improved lightweight YOLOv8-LSW model. The model incorporates the inverted bottleneck structure of LeYOLO-small to design the backbone network, utilizing depthwise separable convolutions and cross-stage feature reuse modules to achieve lightweight design, reducing the number of parameters while enhancing multi-scale feature extraction capabilities. It also integrates the ShuffleAttention mechanism, strengthening the feature response in lesion areas through channel shuffling and spatial attention dual pathways. Finally, WIoUv3 replaces the original loss function, optimizing lesion boundary regression based on a dynamic focusing mechanism. The results show that YOLOv8-LSW achieves a precision of 95.3%, recall of 94.3%, mAP50 of 98.1%, mAP50-95h of 95.6%, and F1-score of 94.80%, which represent improvements of 2.2%, 2.7%, 1.2%, 2.2%, and 2.46%, respectively, compared to the original YOLOv8n. The effectiveness of the improvements was verified through heatmap analysis and ablation experiments. The number of parameters and GFLOPS were reduced by 20.58% and 20.29%, respectively, with an FPS of 341.58. Comparison tests with various mainstream deep learning models also demonstrated that YOLO-LSW performs well in the bitter melon disease detection task. This research provides a technical solution with both lightweight design and strong generalization ability for real-time detection of bitter melon diseases in complex environments, which holds significant application value in promoting precision disease control in smart agriculture.
Keyword ：
bitter melon bitter melon deep learning deep learning disease detection disease detection leaf disease leaf disease YOLO-LSW YOLO-LSW
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| GB/T 7714 | Liu, Shuang , Xu, Haobin , Deng, Ying et al. YOLOv8-LSW: A Lightweight Bitter Melon Leaf Disease Detection Model [J]. | AGRICULTURE-BASEL , 2025 , 15 (12) . |
| MLA | Liu, Shuang et al. "YOLOv8-LSW: A Lightweight Bitter Melon Leaf Disease Detection Model" . | AGRICULTURE-BASEL 15 . 12 (2025) . |
| APA | Liu, Shuang , Xu, Haobin , Deng, Ying , Cai, Yixin , Wu, Yongjie , Zhong, Xiaohao et al. YOLOv8-LSW: A Lightweight Bitter Melon Leaf Disease Detection Model . | AGRICULTURE-BASEL , 2025 , 15 (12) . |
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Phyllanthus emblica L. is a nutritionally and medicinally valuable fruit tree with extensive germplasm diversity. This study evaluated 61 genetically diverse accessions collected from China and South Asia for 27 physicochemical traits, including 13 physical and 14 chemical attributes, to assess genetic diversity and identify elite germplasm for breeding. Substantial phenotypic variation was observed, with coefficients of variation (CV) ranging from 5.13 to 98.09% for physical traits and 1.51-59.82% for biochemical traits. Notably, single fruit weight (CV: 98.09%), flesh stickiness (63.65%), crude fat (59.82%), and polysaccharide content (50.12%) exhibited high variability. Fifteen traits conformed to a normal distribution and were categorized into five probability-based grades. Correlation analysis showed that pericarp strength was significantly positively correlated with soluble solids, titratable acid, total flavonoids, polyphenols, and tannin content, while flesh hardness correlated positively with crude fiber and total sugar. Principal component analysis (PCA) reduced the 27 traits to 12 representative indicators, accounting for 82.54% of total variation. Hierarchical clustering grouped the germplasms into three classes: Class I (19 accessions) with high antioxidant contents and strong textures; Class II (2 accessions) with the largest fruit size and high flesh toughness; and Class III (40 accessions) with high moisture content and lower values for most traits, suitable for juice processing. A comprehensive biochemical evaluation model was constructed using PCA-derived weights, and the top-performing accessions-PEF30, PEF41, PEF35, PEF17, and PEF31-demonstrated superior nutritional quality based on total sugar, polyphenols, vitamin C, and flavonoid contents. These accessions are promising candidates for functional food development, fresh consumption, and cultivar improvement. This study provides a robust analytical framework and theoretical foundation for the classification, conservation, and targeted utilization of P. emblica germplasm in breeding programs.
Keyword ：
Amla Amla Diversity analysis Diversity analysis Fruit quality Fruit quality Resource conservation Resource conservation Tropical and subtropical fruit Tropical and subtropical fruit
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| GB/T 7714 | Wang, Jianchao , Ali, Muhammad Moaaz , Wu, Yongjie et al. Genetic diversity and comprehensive evaluation of physicochemical traits in Phyllanthus emblica L. for breeding and resource utilization [J]. | BMC PLANT BIOLOGY , 2025 , 25 (1) . |
| MLA | Wang, Jianchao et al. "Genetic diversity and comprehensive evaluation of physicochemical traits in Phyllanthus emblica L. for breeding and resource utilization" . | BMC PLANT BIOLOGY 25 . 1 (2025) . |
| APA | Wang, Jianchao , Ali, Muhammad Moaaz , Wu, Yongjie , Zhang, Ge , Zhang, Xiaoyan , Xie, Lixue et al. Genetic diversity and comprehensive evaluation of physicochemical traits in Phyllanthus emblica L. for breeding and resource utilization . | BMC PLANT BIOLOGY , 2025 , 25 (1) . |
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Although abscisic acid (ABA) plays versatile roles at the fruit development and ripening in the non-climacteric grapevine (Vitis vinifera), the ABA-regulated molecular mechanisms underlying the ripening of non-climacteric grape berry are still insufficient. Here, exogenous ABA application increased endogenous ABA contents by triggering its own biosynthetic and signaling pathway, especially VvNCEDs. Transient overexpression of VvNCED2 in tomato accelerated fruit ripening and ABA accumulation. ABA treatment also significantly affected the abundance of genes participated in ethylene and auxin signaling processes and their hormones crossregulation ultimately activated the outbreak of ripening on grape berry. Furthermore, ABA obviously improved several ripening-associated procedures, including color development, sugar accumulation and berry softening, by coordinating a lot of genes elaborated in biosynthetic pathways of anthocyanin, sugar and cell wall, respectively. ABA also extensively mediated the transcription levels of several transcription factor family (e.g. MYB, ERF, bHLH, bZIP and WRKY), indicating a involvement of ABA-mediated transcriptional regulation during berry ripening. Our results of the ABA cascade not only help us better understanding the regulation mechanism of berry ripening but also contribute to other areas of viticultural interest.
Keyword ：
ABA ABA Anthocyanins Anthocyanins Berry ripening Berry ripening Grapevine Grapevine Non-climacteric fruit Non-climacteric fruit
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| GB/T 7714 | Mu, Qian , Leng, Xiangpeng , Wang, Peipei et al. Combined metabolism and transcriptome profiling reveals the novel role of abscisic acid during grape berry ripening [J]. | JOURNAL OF AGRICULTURE AND FOOD RESEARCH , 2025 , 21 . |
| MLA | Mu, Qian et al. "Combined metabolism and transcriptome profiling reveals the novel role of abscisic acid during grape berry ripening" . | JOURNAL OF AGRICULTURE AND FOOD RESEARCH 21 (2025) . |
| APA | Mu, Qian , Leng, Xiangpeng , Wang, Peipei , Cheng, Lixia , Ji, Xinglong , Chen, Jianqing et al. Combined metabolism and transcriptome profiling reveals the novel role of abscisic acid during grape berry ripening . | JOURNAL OF AGRICULTURE AND FOOD RESEARCH , 2025 , 21 . |
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In pear (Pyrus bretschneideri), pollen tube growth is critical for the double fertilization associated with seed setting, which in turn affects fruit yield. The normal deposition of callose mediates the polar growth of pollen tubes. However, the mechanism regulating callose synthesis in pollen tubes remains relatively uncharacterized. In this study, we revealed that the typical pear pollen tube lifecycle has a semi-growth duration (GD(50)) of 16.16 h under in vitro culture conditions. Moreover, callose plugs were deposited throughout the pollen tube lifecycle. The formation of callose plugs was inhibited by 2-deoxy-D-glucose, which also accelerated the senescence of pear pollen tubes. Additionally, PbrCalS1B.1, which encodes a plasma membrane-localized callose synthase, was expressed specifically in pollen tubes and restored the fertility of the Arabidopsis (Arabidopsis thaliana) cals5 mutant, in which callose synthesis is inhibited. However, this restoration of fertility was impaired by the transient silencing of PbrCalS1B.1, which restricts callose plug formation and shortens the pear pollen tube lifecycle. More specifically, PbrbZIP52 regulated PbrCalS1B.1 transcription by binding to promoter A-box elements to maintain the periodic formation of callose plugs and normal pollen tube growth, ultimately leading to double fertilization. This study confirmed that PbrbZIP52 positively affects pear pollen tube longevity by promoting callose synthesis. This finding may be useful for breeding high-yielding pear cultivars and stabilizing fruit setting in commercial orchards.
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| GB/T 7714 | Xia, Zhongheng , Wen, Binxu , Shao, Jing et al. The transcription factor PbrbZIP52 positively affects pear pollen tube longevity by promoting callose synthesis [J]. | PLANT PHYSIOLOGY , 2023 , 191 (3) : 1734-1750 . |
| MLA | Xia, Zhongheng et al. "The transcription factor PbrbZIP52 positively affects pear pollen tube longevity by promoting callose synthesis" . | PLANT PHYSIOLOGY 191 . 3 (2023) : 1734-1750 . |
| APA | Xia, Zhongheng , Wen, Binxu , Shao, Jing , Zhang, Tianci , Hu, Mengmeng , Lin, Lin et al. The transcription factor PbrbZIP52 positively affects pear pollen tube longevity by promoting callose synthesis . | PLANT PHYSIOLOGY , 2023 , 191 (3) , 1734-1750 . |
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Lipoxygenase (LOXs) is a kind of dioxygenase without heme and iron, which plays an important role in the development and adaptation of many plants to the environment. However, the study of strawberry LOX gene family has not been reported. In this study, 14 LOX genes were identified from the diploid woodland strawberry genome. The phylogenetic tree divides the FvLOX gene into two subfamilies: 9-LOX and 13-LOX. Gene duplication event analysis showed that whole-genome duplication (WGD)/segmental duplication and dispersed duplication effectively promoted the expansion of strawberry LOX family. QRT-PCR analysis showed that FvLOX genes were expressed in different tissues. Expression profile analysis showed that FvLOX1 and FvLOX8 were up-regulated under low temperature stress, FvLOX3 and FvLOX7 were up-regulated under drought stress, FvLOX6 and FvLOX9 were up-regulated under salt stress, FvLOX2, FvLOX3 and FvLOX6 were up-regulated under salicylic acid (SA) treatment, FvLOX3, FvLOX11 and FvLOX14 were up-regulated under methyl jasmonate (MeJA) treatment, FvLOX4 and FvLOX14 were up-regulated under abscisic acid (ABA) treatment. Promoter analysis showed that FvLOX genes were involved in plant growth and development and stress response. We analyzed and identified the whole genome of strawberry FvLOX family and characterized a variety of FvLOX candidate genes involved in abiotic stress response. This study laid a theoretical and empirical foundation for the response mechanism of strawberry to abiotic stress.
Keyword ：
abiotic stress abiotic stress cis-acting element cis-acting element expression pattern expression pattern gene family gene family lipoxygenase lipoxygenase strawberry strawberry
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| GB/T 7714 | Li Zhi-qi , Xie Qian , Yan Jia-hu et al. Genome-wide identification and characterization of the abiotic-stress-responsive lipoxygenase gene family in diploid woodland strawberry (Fragaria vesca) [J]. | JOURNAL OF INTEGRATIVE AGRICULTURE , 2022 , 21 (7) : 1982-1996 . |
| MLA | Li Zhi-qi et al. "Genome-wide identification and characterization of the abiotic-stress-responsive lipoxygenase gene family in diploid woodland strawberry (Fragaria vesca)" . | JOURNAL OF INTEGRATIVE AGRICULTURE 21 . 7 (2022) : 1982-1996 . |
| APA | Li Zhi-qi , Xie Qian , Yan Jia-hu , Chen Jian-qing , Chen Qing-xi . Genome-wide identification and characterization of the abiotic-stress-responsive lipoxygenase gene family in diploid woodland strawberry (Fragaria vesca) . | JOURNAL OF INTEGRATIVE AGRICULTURE , 2022 , 21 (7) , 1982-1996 . |
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为探索不同施肥处理，即化肥减量20%～60%并配施有机肥对橄榄产量和果实品质的影响，以“梅埔2号”橄榄为试材，设置对照(不施肥)、单施化肥(常规施肥)3.00 kg、单施有机肥30 kg、80%化肥+有机肥、60%化肥+有机肥、40%化肥+有机肥共6个处理，测定采收期优质果率，产量以及果实可溶性固形物、总多酚、可溶性总糖含量等品质指标。结果表明，与对照(不施肥)相比，各处理可溶性固形物含量、单果质量无显著性变化，但产量和优质果率均显著提高，总多酚含量均显著降低，除单施化肥处理的可溶性总糖显著降低以外，其他处理差异不显著。综合评价得分从高到低依次为80%化肥+有机肥>单施有机肥>施用60%化肥+有机肥>施用40%化肥+有机肥>单施化肥>对照(不施肥)。80%化肥+有机肥处理提高橄榄产量和果实品质最为显著，其优质果率达到92%,株产65.20 kg,是单施化肥处理的3.26倍，保持较高的总多酚含量，且综合效益最高。说明化肥减量配施有机肥可以提高橄榄产量，改善果实品质。
Keyword ：
减施 减施 化肥 化肥 可溶性固形物 可溶性固形物 有机肥 有机肥 株产 株产 橄榄 橄榄
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| GB/T 7714 | 刘林敏 , 陈建清 , 谢倩 et al. 不同施肥处理对橄榄品质和产量的影响 [J]. | 中国南方果树 , 2022 , 51 (02) : 45-49 . |
| MLA | 刘林敏 et al. "不同施肥处理对橄榄品质和产量的影响" . | 中国南方果树 51 . 02 (2022) : 45-49 . |
| APA | 刘林敏 , 陈建清 , 谢倩 , 叶清华 , 王威 , 陈清西 . 不同施肥处理对橄榄品质和产量的影响 . | 中国南方果树 , 2022 , 51 (02) , 45-49 . |
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Growth regulatory factors (GRF) are plant-specific transcription factors that play an important role in plant resistance to stress. This gene family in strawberry has not been investigated previously. In this study, 10 GRF genes were identified in the genome of the diploid woodland strawberry (Fragaria vesca). Chromosome analysis showed that the 10 FvGRF genes were unevenly distributed on five chromosomes. Phylogenetic analysis resolved the FvGRF proteins into five groups. Genes of similar structure were placed in the same group, which was indicative of functional redundance. Whole-genome duplication/segmental duplication and dispersed duplication events effectively promoted expansion of the strawberry GRF gene family. Quantitative reverse transcription-PCR analysis suggested that FvGRF genes played potential roles in the growth and development of vegetative organs. Expression profile analysis revealed that FvGRF3, FvGRF5, and FvGRF7 were up-regulated under low-temperature stress, FvGRF4 and FvGRF9 were up-regulated under high-temperature stress, FvGRF6 and FvGRF8 were up-regulated under drought stress, FvGRF3, FvGRF6, and FvGRF8 were up-regulated under salt stress, FvGRF2, FvGRF7, and FvGRF9 were up-regulated under salicylic acid treatment, and FvGRF3, FvGRF7, FvGRF9, and FvGRF10 were up-regulated under abscisic acid treatment. Promoter analysis indicated that FvGRF genes were involved in plant growth and development and stress response. These results provide a theoretical and empirical foundation for the elucidation of the mechanisms of abiotic stress responses in strawberry.
Keyword ：
abiotic stress abiotic stress cis-acting element cis-acting element expression pattern expression pattern gene family gene family GRF GRF strawberry strawberry
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| GB/T 7714 | Li, Zhiqi , Xie, Qian , Yan, Jiahui et al. Genome-Wide Identification and Characterization of the Abiotic-Stress-Responsive GRF Gene Family in Diploid Woodland Strawberry (Fragaria vesca) [J]. | PLANTS-BASEL , 2021 , 10 (9) . |
| MLA | Li, Zhiqi et al. "Genome-Wide Identification and Characterization of the Abiotic-Stress-Responsive GRF Gene Family in Diploid Woodland Strawberry (Fragaria vesca)" . | PLANTS-BASEL 10 . 9 (2021) . |
| APA | Li, Zhiqi , Xie, Qian , Yan, Jiahui , Chen, Jianqing , Chen, Qingxi . Genome-Wide Identification and Characterization of the Abiotic-Stress-Responsive GRF Gene Family in Diploid Woodland Strawberry (Fragaria vesca) . | PLANTS-BASEL , 2021 , 10 (9) . |
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BackgroundGene transcripts that show invariant abundance during development are ideal as reference genes (RGs) for accurate gene expression analyses, such as RNA blot analysis and reverse transcription-quantitative real time PCR (RT-qPCR) analyses. In a genome-wide analysis, we selected three "Commonly used" housekeeping genes (HKGs), fifteen "Traditional" HKGs, and nine novel genes as candidate RGs based on 80 publicly available transcriptome libraries that include data for receptacle development in eight strawberry cultivars.ResultsThe results of the multifaceted assessment consistently revealed that expression of the novel RGs showed greater stability compared with that of the "Commonly used" and "Traditional" HKGs in transcriptome and RT-qPCR analyses. Notably, the majority of stably expressed genes were associated with the ubiquitin proteasome system. Among these, two 26s proteasome subunits, RPT6A and RPN5A, showed superior expression stability and abundance, and are recommended as the optimal RGs combination for normalization of gene expression during strawberry receptacle development.ConclusionThese findings provide additional useful and reliable RGs as resources for the accurate study of gene expression during receptacle development in strawberry cultivars.
Keyword ：
Receptacle development Receptacle development Reference gene Reference gene Strawberry Strawberry Ubiquitin 26S proteasome system Ubiquitin 26S proteasome system
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| GB/T 7714 | Chen, Jianqing , Zhou, Jinyu , Hong, Yanhong et al. Genome-wide identification of ubiquitin proteasome subunits as superior reference genes for transcript normalization during receptacle development in strawberry cultivars [J]. | BMC GENOMICS , 2021 , 22 (1) . |
| MLA | Chen, Jianqing et al. "Genome-wide identification of ubiquitin proteasome subunits as superior reference genes for transcript normalization during receptacle development in strawberry cultivars" . | BMC GENOMICS 22 . 1 (2021) . |
| APA | Chen, Jianqing , Zhou, Jinyu , Hong, Yanhong , Li, Zekun , Cheng, Xiangyu , Zheng, Aiying et al. Genome-wide identification of ubiquitin proteasome subunits as superior reference genes for transcript normalization during receptacle development in strawberry cultivars . | BMC GENOMICS , 2021 , 22 (1) . |
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以红花草莓品种‘莓红’为研究材料,观察花瓣发育过程中色泽及花色苷变化规律,同时对4个发育时期花瓣进行转录组测序,基于相关性筛选花色苷合成途径的关键功能基因及转录调控因子,结果表明:(1)花瓣发育过程中,花色苷总含量呈先升后降趋势,且在半开期达到最高;(2)花色苷合成途径关键功能基因FaPAL、Fa4CL-1、Fa4CL-2、FaDFR、Fa3GT表达水平与花色苷含量正相关;(3)R2R3-MYB基因FaMYB6和FaMYB90与花色苷含量呈正相关;(4)Pearson相关性分析表明FaMYB6与FaPAL、FaDFR显著正相关,FaMYB90与FaPAL、Fa4CL-1、Fa4CL-2、FaDFR、Fa3GT极显著正相关,Fa MYB82则与上述5个结构基因之间均极显著负相关。综上,‘莓红’草莓花瓣发育过程中,花色苷积累引起花瓣颜色变红,FaMYB82、FaMYB6、FaMYB90可能通过调节FaPAL、Fa4CL、FaDFR和Fa3GT的表达来调控花瓣色泽形成。
Keyword ：
R2R3-MYB转录因子 R2R3-MYB转录因子 生物合成 生物合成 红花 红花 花瓣 花瓣 花色苷 花色苷 草莓 草莓
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| GB/T 7714 | 洪燕红 , 叶清华 , 李泽坤 et al. 红花草莓‘莓红’花瓣花色苷积累及其MYB基因的表达分析 [J]. | 园艺学报 , 2021 , 48 (08) : 1470-1484 . |
| MLA | 洪燕红 et al. "红花草莓‘莓红’花瓣花色苷积累及其MYB基因的表达分析" . | 园艺学报 48 . 08 (2021) : 1470-1484 . |
| APA | 洪燕红 , 叶清华 , 李泽坤 , 王威 , 谢倩 , 陈清西 et al. 红花草莓‘莓红’花瓣花色苷积累及其MYB基因的表达分析 . | 园艺学报 , 2021 , 48 (08) , 1470-1484 . |
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