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学者姓名:徐景升
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Sugarcane mosaic disease, primarily caused by sugarcane mosaic virus (SCMV), seriously affects sugarcane production. The 6K2 protein is crucial for potyvirus infection. Calnexin (CNX) and calreticulin (CRT) play key roles in plants growth, development, and response to stresses. However, the CRT and CNX families have not been studied in sugarcane. Here, we screened CNX from a sugarcane cDNA yeast library with 6K2 of SCMV as bait. We identified 65 ScCRTs and 11 ScCNXs from the sugarcane cultivar XTT22, which were phylogenetically classified into three groups. The promoter regions of these genes contain multiple cis-elements related to growth and development, environmental stress, plant hormone responses, and light responses. Transcriptomic analysis revealed differential spatiotemporal expression of ScCRTs and ScCNXs. We cloned four CRT and one CNX genes from XTT22, which localized to the endoplasmic reticulum. ScCNX1-1 was differentially expressed in sugarcane tissues and was upregulated upon SCMV infection. Protein-protein assays demonstrated that only ScCNX1-1 interacts with SCMV-6K2. Transient expression of ScCNX1-1 in Nicotiana benthamiana suppressed turnip mosaic virus (TuMV) infection. Moreover, all four CNXs, but not the CRTs from N. benthamiana, interacted with TuMV-6K2. Transient NbCNX silencing inhibited TuMV infection. These findings indicate that the interaction of CNX with 6K2 is a conserved mechanism for potyvirus infection, and that CNX expression is fine-tuned and tightly controlled upon viral infection. This study sheds light on the roles of ScCRT and ScCNX genes in sugarcane growth, development, and response to stresses, and provides a potential molecular target for engineering SCMV resistance in sugarcane.
Keyword :
Calnexin Calnexin Calreticulin Calreticulin N. benthamiana N. benthamiana Potyvirus Potyvirus Sugarcane mosaic virus Sugarcane mosaic virus
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| GB/T 7714 | Liu, Haoming , Li, Yifei , Zhan, Zhenhe et al. Identification of calreticulin and calnexin gene families in sugarcane and mechanistic elucidation of their roles in response to SCMV infection [J]. | PLANT STRESS , 2025 , 18 . |
| MLA | Liu, Haoming et al. "Identification of calreticulin and calnexin gene families in sugarcane and mechanistic elucidation of their roles in response to SCMV infection" . | PLANT STRESS 18 (2025) . |
| APA | Liu, Haoming , Li, Yifei , Zhan, Zhenhe , Zhang, Hai , Yang, Zongtao , Yu, Quanxin et al. Identification of calreticulin and calnexin gene families in sugarcane and mechanistic elucidation of their roles in response to SCMV infection . | PLANT STRESS , 2025 , 18 . |
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Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) is one of the key enzymes of glycolysis and plays important roles in plant growth, development and plant-pathogen interactions. However, studies on the characteristics and functions of sugarcane (Saccharum spp. hybrid) GAPDH family genes are still lacking. In the present study, 24, 75 and 91 GAPDH genes were identified in Saccharum spontaneum and sugarcane cultivars R570 and XTT22, respectively. A phylogenetic tree revealed that these genes could be divided into four groups, i. e., the GAPC group, the GAPA group, the GAPB group and the GAPCp group. These GAPDH genes contained multiple cis-acting elements related to stress and hormone response. RNA-seq analysis demonstrated that the S. spontaneum GAPDH genes and XTT22-GAPDH genes were constitutively expressed at different developmental stages or in different tissues. ScGAPA, ScGAPB, ScGAPC and ScGAPCp, representatives of each group of the GAPDH family, were isolated from the sugarcane cultivar XTT22. RT-qPCR analysis revealed that the expression levels of ScGAPA and ScGAPB were exponentially greater than those of ScGAPC or ScGAPCp in the leaves; these four genes were differentially expressed upon SCMV infection and after abiotic treatments such as NaCl, salicylic acid, H2O2 or MeJA. DAB staining and detection of ATG8-I and ATG8-II demonstrated that SCMV infection induces bursts of reactive oxygen species and autophagy in sugarcane leaves. ScGAPA, ScGAPB, ScGAPC, and ScGAPCp interacted with ScATG3, thereby suppressing autophagy in Nicotiana benthamiana plants. However, oxidative stress impaired the interaction of ScATG3 with ScGAPA, ScGAPB, ScGAPC and ScGAPCp, indicating that SCMV infection activates autophagy by disrupting ScGAPDH-ScATG3 interactions. The present study reveals the origin and evolution of the GAPDH gene family in sugarcane and the potential roles of this gene family in response to sugarcane mosaic virus (SCMV) infection.
Keyword :
Autophagy Autophagy GAPDH GAPDH ROS ROS SCMV SCMV Sugarcane Sugarcane
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| GB/T 7714 | Yang, Zongtao , Zeng, Kang , Zhan, Zhenhe et al. Molecular identification of sugarcane glyceraldehyde-3-phosphate dehydrogenases and their involvement in SCMV infection in sugarcane [J]. | INDUSTRIAL CROPS AND PRODUCTS , 2025 , 232 . |
| MLA | Yang, Zongtao et al. "Molecular identification of sugarcane glyceraldehyde-3-phosphate dehydrogenases and their involvement in SCMV infection in sugarcane" . | INDUSTRIAL CROPS AND PRODUCTS 232 (2025) . |
| APA | Yang, Zongtao , Zeng, Kang , Zhan, Zhenhe , Yu, Quanxin , Jiao, Wendi , Luo, Tingxu et al. Molecular identification of sugarcane glyceraldehyde-3-phosphate dehydrogenases and their involvement in SCMV infection in sugarcane . | INDUSTRIAL CROPS AND PRODUCTS , 2025 , 232 . |
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Introduction Sugarcane mosaic virus (SCMV, Potyvirus) causes mosaic diseases and seriously threatens sugarcane production. Potyviral 6K2 protein plays a key role in viral infections. We previously screened a tetraspanin (TET)-like protein that interacts with SCMV-6K2 from a sugarcane cDNA yeast library. Although TETs have been extensively studied in response to viral infections in animals, the TET gene family in sugarcane and its role in SCMV infections remain largely unknown. This study aimed to identify the TET genes in sugarcane and determine their response to SCMV infection.Methods We employed genome-wide identification, phylogenetic analysis, real-time quantitative PCR (RT-qPCR), subcellular localization, and multiple protein-protein interaction assays to characterize TETs and their interactions with viral 6K2 proteins.Results We identified 35, 113, 73, and 17 TETs in the genomes of Saccharum spontaneum, sugarcane cultivar R570, sugarcane cultivar Xintaitang 22 (XTT22), and Nicotiana benthamiana, respectively. Phylogenetic tree analysis classified the TETs into nine distinct groups. Nine TET genes were cloned from XTT22 and designated ScTET2, ScTET8, ScTET13, ScTET23, ScTET34, ScTET55, ScTET67, ScTET78, and ScTET96. RT-qPCR demonstrated the differential expression of these genes following SCMV infection. Furthermore, subcellular localization assays revealed that they were mainly localized to the plasma membrane (PM), except for ScTET2 and ScTET8, which were localized in the cytoplasm and formed irregular spherical structures of different sizes. Yeast two-hybrid (Y2H), bimolecular fluorescent complementation, and luciferase complementation assays revealed extensive interactions between the ScTETs and SCMV-6K2, primarily in the PM. Y2H assays also showed that TETs of Arabidopsis and N. benthamiana extensively interacted with the 6K2 protein of turnip mosaic virus.Discussion This study reveals a potential mechanism by which potyviruses employ 6K2 to interact with TETs to establish infection in host plants, thus highlighting potential molecular targets for engineering sugarcane resistance against SCMV.
Keyword :
potyvirus potyvirus sugarcane sugarcane sugarcane mosaic virus sugarcane mosaic virus tetraspanin tetraspanin
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| GB/T 7714 | Cui, Zhiyuan , Li, Yifei , Zeng, Kang et al. Identification of the tetraspanin gene family in sugarcane and its response to sugarcane mosaic virus infection [J]. | FRONTIERS IN PLANT SCIENCE , 2025 , 16 . |
| MLA | Cui, Zhiyuan et al. "Identification of the tetraspanin gene family in sugarcane and its response to sugarcane mosaic virus infection" . | FRONTIERS IN PLANT SCIENCE 16 (2025) . |
| APA | Cui, Zhiyuan , Li, Yifei , Zeng, Kang , Yang, Zongtao , Yu, Quanxin , Liu, Haoming et al. Identification of the tetraspanin gene family in sugarcane and its response to sugarcane mosaic virus infection . | FRONTIERS IN PLANT SCIENCE , 2025 , 16 . |
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Introduction: Remorins (REMs) are plant-specific membrane-associated proteins that play important roles in plant-pathogen interactions and environmental adaptations. Group I REMs are extensively involved in virus infection. However, little is known about the REM gene family in sugarcane (Saccharum spp. hyrid), the most important sugar and energy crop around world. Methods: Comparative genomics were employed to analyze the REM gene family in Saccharum spontaneum. Transcriptomics or RT-qPCR were used to analyze their expression files in different development stages or tissues under different treatments. Yeast two hybrid, bimolecular fluorescence complementation and co-immunoprecipitation assays were applied to investigate the protein interaction. Results: In this study, 65 REMs were identified from Saccharum spontaneum genome and classified into six groups based on phylogenetic tree analysis. These REMs contain multiple cis-elements associated with growth, development, hormone and stress response. Expression profiling revealed that among different SsREMs with variable expression levels in different developmental stages or different tissues. A pair of alleles, ScREM1.5e-1/-2, were isolated from the sugarcane cultivar ROC22. ScREM1.5e-1/-2 were highly expressed in leaves, with the former expressed at significantly higher levels than the latter. Their expression was induced by treatment with H2O2, ABA, ethylene, brassinosteroid, SA or MeJA, and varied upon Sugarcane mosaic virus (SCMV) infection. ScREM1.5e-1 was localized to the plasma membrane (PM), while ScREM1.5e-2 was localized to the cytoplasm or nucleus. ScREM1.5e-1/-2 can self-interact and interact with each other, and interact with VPgs from SCMV, Sorghum mosaic virus, or Sugarcane streak mosaic virus. The interactions with VPgs relocated ScREM1.5e-1 from the PM to the cytoplasm. Discussion: These results reveal the origin, distribution and evolution of the REM gene family in sugarcane and may shed light on engineering sugarcane resistance against sugarcane mosaic pathogens.
Keyword :
gene family gene family Remorin Remorin sugarcane sugarcane virus virus VPg VPg
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| GB/T 7714 | Yang, Zongtao , Cheng, Guangyuan , Yu, Quanxin et al. Identification and characterization of the Remorin gene family in Saccharum and the involvement of ScREM1.5e-1/-2 in SCMV infection on sugarcane [J]. | FRONTIERS IN PLANT SCIENCE , 2024 , 15 . |
| MLA | Yang, Zongtao et al. "Identification and characterization of the Remorin gene family in Saccharum and the involvement of ScREM1.5e-1/-2 in SCMV infection on sugarcane" . | FRONTIERS IN PLANT SCIENCE 15 (2024) . |
| APA | Yang, Zongtao , Cheng, Guangyuan , Yu, Quanxin , Jiao, Wendi , Zeng, Kang , Luo, Tingxu et al. Identification and characterization of the Remorin gene family in Saccharum and the involvement of ScREM1.5e-1/-2 in SCMV infection on sugarcane . | FRONTIERS IN PLANT SCIENCE , 2024 , 15 . |
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类钙调素(Calmodulin-like,CML)是植物特有的钙信号感受器蛋白之一,参与植物生长发育和响应外界环境信号转导。甘蔗(Saccharum spp.hybrid)中CML应答甘蔗花叶病毒(Sugarcane mosaic virus,SCMV)侵染尚未见报道。本研究从甘蔗热带种Badila (S.officinarum)中克隆了一个CML基因,命名为Sc CML13。该基因开放读码框(open reading frame,ORF)长度为519 bp,编码172 aa。生物信息学分析表明,Sc CML13属于稳定的亲水脂溶蛋白,无跨膜结构域,有4个结合Ca
Keyword :
P3N-PIPO P3N-PIPO 甘蔗花叶病毒 甘蔗花叶病毒 类钙调素 类钙调素 蛋白互作 蛋白互作
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| GB/T 7714 | 玉泉馨 , 杨宗桃 , 张海 et al. 甘蔗类钙调素ScCML13与SCMV运动蛋白P3N-PIPO的互作研究 [J]. | 作物学报 , 2024 , 50 (07) : 1855-1866 . |
| MLA | 玉泉馨 et al. "甘蔗类钙调素ScCML13与SCMV运动蛋白P3N-PIPO的互作研究" . | 作物学报 50 . 07 (2024) : 1855-1866 . |
| APA | 玉泉馨 , 杨宗桃 , 张海 , 程光远 , 焦文迪 , 曾康 et al. 甘蔗类钙调素ScCML13与SCMV运动蛋白P3N-PIPO的互作研究 . | 作物学报 , 2024 , 50 (07) , 1855-1866 . |
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本发明公开了一种甘蔗花叶病毒弱毒突变体的构建及其应用。所述突变体是在甘蔗花叶病毒SCMV‑FZ1的HC‑Pro蛋白上进行定点突变获得,所述定点突变是指将HC‑Pro蛋白上的第345位的氨基酸由F突变为Y得到;所述甘蔗花叶病毒SCMV‑FZ1的HC‑Pro蛋白编码序列如SEQ ID NO.1所示,所述甘蔗花叶病毒SCMV‑FZ1的HC‑Pro蛋白序列如SEQ ID NO.2所示。SCMVSc的HC‑Pro蛋白是重要的致病因子,本发明鉴定到了其致病因子活性的关键氨基酸位点,通过对该位点的突变,创制了弱毒SCMVSc株系,并成功地用于交叉保护防治强毒SCMVSc株系对甘蔗的侵染。
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| GB/T 7714 | 徐景升 , 杨宗桃 , 程光远 . 甘蔗花叶病毒弱毒突变体的构建及其应用 : CN202410172828.9[P]. | 2024-02-07 . |
| MLA | 徐景升 et al. "甘蔗花叶病毒弱毒突变体的构建及其应用" : CN202410172828.9. | 2024-02-07 . |
| APA | 徐景升 , 杨宗桃 , 程光远 . 甘蔗花叶病毒弱毒突变体的构建及其应用 : CN202410172828.9. | 2024-02-07 . |
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Sugarcane mosaic virus (SCMV), one of the main pathogens causing sugarcane mosaic disease, is widespread in sugarcane (Saccharum spp. hybrid) planting areas and causes heavy yield losses. RESPIRATORY BURST OXIDASE HOMOLOG (RBOH) NADPH oxidases and plasma membrane intrinsic proteins (PIPs) have been associated with the response to SCMV infection. However, the underlying mechanism is barely known. In the present study, we demonstrated that SCMV infection upregulates the expression of ScRBOHs and the accumulation of hydrogen peroxide (H2O2), which inhibits SCMV replication. All eight sugarcane PIPs (ScPIPs) interacted with SCMV-encoded protein 6K2, whereby two PIP2s (ScPIP2;1 and ScPIP2;4) were verified as capable of H2O2 transport. Furthermore, we revealed that SCMV-6K2 interacts with ScPIP2;4 via transmembrane domain 5 to interfere with the oligomerization of ScPIP2;4, subsequently impairing ScPIP2;4 transport of H2O2. This study highlights a mechanism adopted by SCMV to employ 6K2 to counteract the host resistance mediated by H2O2 to facilitate virus infection and provides potential molecular targets for engineering sugarcane resistance against SCMV.
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| GB/T 7714 | Zhang, Hai , Yang, Zongtao , Cheng, Guangyuan et al. Sugarcane mosaic virus employs 6K2 protein to impair ScPIP2;4 transport of H2O2 to facilitate virus infection [J]. | PLANT PHYSIOLOGY , 2023 , 194 (2) : 715-731 . |
| MLA | Zhang, Hai et al. "Sugarcane mosaic virus employs 6K2 protein to impair ScPIP2;4 transport of H2O2 to facilitate virus infection" . | PLANT PHYSIOLOGY 194 . 2 (2023) : 715-731 . |
| APA | Zhang, Hai , Yang, Zongtao , Cheng, Guangyuan , Luo, Tingxu , Zeng, Kang , Jiao, Wendi et al. Sugarcane mosaic virus employs 6K2 protein to impair ScPIP2;4 transport of H2O2 to facilitate virus infection . | PLANT PHYSIOLOGY , 2023 , 194 (2) , 715-731 . |
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谷胱甘肽S-转移酶(glutathione S-transferase, GST, EC2.5.1.18)广泛分布于具有细胞结构的生物中。在植物中,GST参与调控生长发育、异生物质解毒及逆境应答。本课题组以甘蔗花叶病毒(Sugarcanemosaicvirus,SCMV)编码蛋白P3N-PIPO为诱饵,从甘蔗(Saccharumspp.hybrid)叶片cDNA酵母文库中筛选到1个GST基因,并从甘蔗原始栽培种Badila中克隆了该基因,其开放读码框(open reading frame, ORF)长度为645 bp,编码214个氨基酸。序列比对及进化树分析表明,该基因编码蛋白属于GST家族的Phi (F)类型(GSTF),因此命名为ScGSTF1。进一步的生物信息学分析表明,ScGSTF1不存在跨膜区域,为稳定的亲水性脂溶蛋白;GST蛋白在单子叶和双子叶植物中及C3和C4植物中存在明显的分化。酵母双杂交(yeast two-hybrid, Y2H)和双分子荧光互补(bimolecular fluorescence complementation, BiFC)试验表明, ScGSTF1与SCMV-P3N-PIPO蛋白互作。亚细胞定位试验表明ScGSTF1定位于内质网。实时荧光定量PCR分析表明, ScGSTF1在甘蔗各个组织中显著差异表达,在第3节间中的表达量最高,在心叶及根中的表达量最低; SCMV侵染显著性影响ScGSTF1基因的表达水平,侵染早期上调表达,随后下调,但仍保持显著高于对照的水平。
Keyword :
P3N-PIPO P3N-PIPO 甘蔗 甘蔗 甘蔗花叶病毒 甘蔗花叶病毒 蛋白互作 蛋白互作 谷胱甘肽硫转移酶 谷胱甘肽硫转移酶
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| GB/T 7714 | 杨宗桃 , 焦文迪 , 张海 et al. 甘蔗谷胱甘肽硫转移酶ScGSTF1与P3N-PIPO互作应答甘蔗花叶病毒侵染的研究 [J]. | 作物学报 , 2023 , 49 (10) : 2665-2676 . |
| MLA | 杨宗桃 et al. "甘蔗谷胱甘肽硫转移酶ScGSTF1与P3N-PIPO互作应答甘蔗花叶病毒侵染的研究" . | 作物学报 49 . 10 (2023) : 2665-2676 . |
| APA | 杨宗桃 , 焦文迪 , 张海 , 张克闽 , 程光远 , 罗廷绪 et al. 甘蔗谷胱甘肽硫转移酶ScGSTF1与P3N-PIPO互作应答甘蔗花叶病毒侵染的研究 . | 作物学报 , 2023 , 49 (10) , 2665-2676 . |
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IntroductionPlant-specific Class III peroxidases (PRXs) play a crucial role in lignification, cell elongation, seed germination, and biotic and abiotic stresses. MethodsThe class III peroxidase gene family in sugarcane were identified by bioinformatics methods and realtime fluorescence quantitative PCR. ResultsEighty-two PRX proteins were characterized with a conserved PRX domain as members of the class III PRX gene family in R570 STP. The ShPRX family genes were divided into six groups by the phylogenetic analysis of sugarcane, Saccharum spontaneum, sorghum, rice, and Arabidopsis thaliana. The analysis of promoter cis-acting elements revealed that most ShPRX family genes contained cis-acting regulatory elements involved in ABA, MeJA, light responsiveness, anaerobic induction, and drought inducibility. An evolutionary analysis indicated that ShPRXs was formed after Poaceae and Bromeliaceae diverged, and tandem duplication events played a critical role in the expansion of ShPRX genes of sugarcane. Purifying selection maintained the function of ShPRX proteins. SsPRX genes were differentially expressed in stems and leaves at different growth stages in S. spontaneum. However, ShPRX genes were differentially expressed in the SCMV-inoculated sugarcane plants. A qRT-PCR analysis showed that SCMV, Cd, and salt could specifically induce the expression of PRX genes of sugarcane. DiscussionThese results help elucidate the structure, evolution, and functions of the class III PRX gene family in sugarcane and provide ideas for the phytoremediation of Cd-contaminated soil and breeding new sugarcane varieties resistant to sugarcane mosaic disease, salt, and Cd stresses.
Keyword :
cadmium cadmium class III peroxidase class III peroxidase salt stress salt stress sugarcane sugarcane sugarcane mosaic virus sugarcane mosaic virus
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| GB/T 7714 | Shang, Heyang , Fang, Linqi , Qin, Lifang et al. Genome-wide identification of the class III peroxidase gene family of sugarcane and its expression profiles under stresses [J]. | FRONTIERS IN PLANT SCIENCE , 2023 , 14 . |
| MLA | Shang, Heyang et al. "Genome-wide identification of the class III peroxidase gene family of sugarcane and its expression profiles under stresses" . | FRONTIERS IN PLANT SCIENCE 14 (2023) . |
| APA | Shang, Heyang , Fang, Linqi , Qin, Lifang , Jiang, Hongtao , Duan, Zhenzhen , Zhang, Hai et al. Genome-wide identification of the class III peroxidase gene family of sugarcane and its expression profiles under stresses . | FRONTIERS IN PLANT SCIENCE , 2023 , 14 . |
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易化子超家族转运蛋白(major facilitator superfamily,MFS)在生物中普遍存在,锌诱导类辅助因子(zinc induced facilitator like,ZIFL)是MFS成员,参与小分子有机物运输。本课题组前期利用酵母双杂交(yeast two-hybrid,Y2H)技术从甘蔗(Saccharum spp.hybrid)中分离鉴定了1个与甘蔗花叶病毒(Sugarcane mosaic virus,SCMV)编码蛋白6K2互作的ZIFL,命名为Sc ZIFL1。本研究利用双分子荧光互补技术(bimolecular fluorescence complementation,Bi FC)进一步验证了Sc ZIFL1与SCMV-6K2的互作。生物信息学分析表明,Sc ZIFL1长度为484个氨基酸,无信号肽,具有12个跨膜结构域,为不稳定的疏水性蛋白。序列比对分析表明,Sc ZIFL1具有MFS保守的半胱氨酸模体、特征基序及反向运输基序。系统进化树分析表明,该蛋白在单子叶和双子叶植物之间,以及单子叶C3植物和C4植物之间存在明显分化。亚细胞定位试验表明,Sc ZIFL1定位于液泡膜,部分与SCMV-6K2共定位。实时荧光定量PCR分析发现,Sc ZIFL1基因的表达具有明显的组织特异性,在茎中表达最高,叶中次之,根中最低;在完成形态建成且处于旺盛工作状态的+1叶和第8节间中的相对表达量显著高于未成熟的心叶、第3节间和渐衰叶片+7叶;接种SCMV后,Sc ZIFL1表达量在侵染早期显著上调,随后持续高表达。
Keyword :
6K2 6K2 ZIFL1 ZIFL1 甘蔗花叶病毒 甘蔗花叶病毒 蛋白互作 蛋白互作
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| GB/T 7714 | 刘淑娴 , 杨宗桃 , 程光远 et al. 甘蔗易化子家族蛋白Sc ZIFL1与6K2互作应答SCMV侵染 [J]. | 作物学报 , 2022 , 48 (12) : 3080-3090 . |
| MLA | 刘淑娴 et al. "甘蔗易化子家族蛋白Sc ZIFL1与6K2互作应答SCMV侵染" . | 作物学报 48 . 12 (2022) : 3080-3090 . |
| APA | 刘淑娴 , 杨宗桃 , 程光远 , 张海 , 周营栓 , 商贺阳 et al. 甘蔗易化子家族蛋白Sc ZIFL1与6K2互作应答SCMV侵染 . | 作物学报 , 2022 , 48 (12) , 3080-3090 . |
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